Class FilteringSamIterator

    • Constructor Detail

      • FilteringSamIterator

        public FilteringSamIterator​(Iterator<SAMRecord> iterator,
                                    SamRecordFilter filter,
                                    boolean filterByPair)
        Constructor
        Parameters:
        iterator - the backing iterator
        filter - the filter (which may be a FilterAggregator)
        filterByPair - if true, filter reads in pairs
      • FilteringSamIterator

        public FilteringSamIterator​(Iterator<SAMRecord> iterator,
                                    SamRecordFilter filter)
        Constructor
        Parameters:
        iterator - the backing iterator
        filter - the filter (which may be a FilterAggregator)