Package htsjdk.tribble.gff
Class SequenceRegion
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- htsjdk.tribble.gff.SequenceRegion
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description boolean
equals(SequenceRegion other)
String
getContig()
Gets the contig name for the contig this is mapped to.int
getEnd()
int
getStart()
boolean
isCircular()
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Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
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Methods inherited from interface htsjdk.samtools.util.Locatable
contains, contigsMatch, getLengthOnReference, overlaps, withinDistanceOf
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Method Detail
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getContig
public String getContig()
Description copied from interface:Locatable
Gets the contig name for the contig this is mapped to. May return null if there is no unique mapping.
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getStart
public int getStart()
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getEnd
public int getEnd()
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isCircular
public boolean isCircular()
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equals
public boolean equals(SequenceRegion other)
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